OVERVIEW HOW ENZYMES ARE SELECTED FOR SCREENING RESOURCES FAQ
Overview

Unlock untapped enzyme sequence space to enable optimal exploration

Our novel enzyme sequences have been identified from diverse uncultured microbial single-cell genomes and have been selected for desirable properties using ML-assisted models based on structure prediction, structure-based clustering and filtering - you likely will not find these sequences anywhere else.


Transaminases (TAs) are enzymes that catalyze the transfer of an amine group from an amine donor to a ketone or aldehyde. This ability to facilitate the stereoselective amination of prochiral ketones is valuable in pharmaceutical manufacturing, where the demand for chiral amines as building blocks for active pharmaceutical ingredients (APIs) is high.


We have identified and narrowed down a subset of TA enzymes that maintain activity in a variety of extreme conditions across many diverse substrates, useful for the pharmaceutical manufacturing process.


Our screening kit enables the selection of functionally relevant sequences with the future possibility of combining these with downstream enzyme engineering resources to provide a more efficient pathway for protein engineering.

How enzymes are selected for screening

The bitBiome bit-GEM database is the leading resource for searchable and highly usable microbe genome sequences. Drawing on nature’s most potent microbial resources including samples from environments like soil, hotsprings, marine water, mining sites, and other extreme conditions, the bit-GEM database contains a vast array of gene sequences acquired by the bitBiome single-cell sequencing platform. This sequencing method ensures deeper genome coverage, allowing for the discovery of microbial “dark matter”. These sequences have low similarity to those in the public realm, giving the customer the freedom to operate within that sequence space.

Unlock untapped enzyme sequence space
Unlock untapped enzyme sequence space
Thousands of enzyme candidates pre-screened for activity
High sequence diversity to meet specific needs
Novel sequences, unknown to the public realm, gives you freedom to operate
Maximize your Engineering Efforts
Maximize your Engineering Efforts
Screen through pre-selected novel transaminase variants needed for hit identification
Diverse substrate specificity including hard to manage bulky substrates 
Consult with the Experts
Consult with the Experts
 bitBiome + Twist together provide all of the resources needed to further generate, optimize, and test variant libraries
Easy access to the experts to help further your future enzyme engineering efforts
Experience expedited screening with Twist + bitBiome

Enzyme Screening 48 Enzymes for screening

Next-day shipping Next-day shipping

Scale-up available Scale-up available

Contact Us

Unlock untapped enzyme sequence space to enable optimal exploration

Our novel enzyme sequences have been identified from diverse uncultured microbial single-cell genomes and have been selected for desirable properties using ML-assisted models based on structure prediction, structure-based clustering and filtering - you likely will not find these sequences anywhere else.


Transaminases (TAs) are enzymes that catalyze the transfer of an amine group from an amine donor to a ketone or aldehyde. This ability to facilitate the stereoselective amination of prochiral ketones is valuable in pharmaceutical manufacturing, where the demand for chiral amines as building blocks for active pharmaceutical ingredients (APIs) is high.


We have identified and narrowed down a subset of TA enzymes that maintain activity in a variety of extreme conditions across many diverse substrates, useful for the pharmaceutical manufacturing process.


Our screening kit enables the selection of functionally relevant sequences with the future possibility of combining these with downstream enzyme engineering resources to provide a more efficient pathway for protein engineering.

How enzymes are selected for screening

The bitBiome bit-GEM database is the leading resource for searchable and highly usable microbe genome sequences. Drawing on nature’s most potent microbial resources including samples from environments like soil, hotsprings, marine water, mining sites, and other extreme conditions, the bit-GEM database contains a vast array of gene sequences acquired by the bitBiome single-cell sequencing platform. This sequencing method ensures deeper genome coverage, allowing for the discovery of microbial “dark matter”. These sequences have low similarity to those in the public realm, giving the customer the freedom to operate within that sequence space.

Experience expedited screening with Twist + bitBiome

Enzyme Screening 48 Enzymes for screening

Next-day shipping Next-day shipping

Scale-up available Scale-up available

Contact Us

Unlock untapped enzyme sequence space
Unlock untapped enzyme sequence space
Thousands of enzyme candidates pre-screened for activity
High sequence diversity to meet specific needs
Novel sequences, unknown to the public realm, gives you freedom to operate
Maximize your Engineering Efforts
Maximize your Engineering Efforts
Screen through pre-selected novel transaminase variants needed for hit identification
Diverse substrate specificity including hard to manage bulky substrates 
Consult with the Experts
Consult with the Experts
 bitBiome + Twist together provide all of the resources needed to further generate, optimize, and test variant libraries
Easy access to the experts to help further your future enzyme engineering efforts
How enzymes are selected for screening

How Enzymes Are Selected For Screening

Drawing on nature’s potent microbial resources including samples from environments like soil, hotsprings, marine water, mining sites, and other extreme conditions, the bit-GEM database contains a vast array of gene sequences acquired by the bitBiome single-cell sequencing platform. This sequencing method ensures deeper genome coverage, allowing for the discovery of microbial “dark matter”. These sequences have low similarity to those in the public realm, providing better freedom to operate within that sequence space. The selection of the 48 enzymes provided in this kit was powered not only by Twist DNA synthesis capabilities but also a collaborative bioinformatics effort to refine the functional sequence space.
 

How Enzymes Were Selected For Our Kit

A total of 369 active transaminases were identified with 19 substrates. 273 of the enzymes were found to be active in 10% DMSO with 30 active at 60°C. Finally, the enzymes were tested for pH sensitivity and selectivity.

Criteria for Transaminase Screening

Criteria for Transaminase Screening

 

Below is a breakdown of the enzymes tested against various substrates in the varying conditions previously described (various % of DMSO, organic solvents, temperatures, and pH levels).

Number of Enzymes Graph

Experience expedited screening with Twist + bitBiome

Enzyme Screening 48 Enzymes for screening

Next-day shipping Next-day shipping

Scale-up available Scale-up available

Contact Us

How Enzymes Are Selected For Screening

Drawing on nature’s potent microbial resources including samples from environments like soil, hotsprings, marine water, mining sites, and other extreme conditions, the bit-GEM database contains a vast array of gene sequences acquired by the bitBiome single-cell sequencing platform. This sequencing method ensures deeper genome coverage, allowing for the discovery of microbial “dark matter”. These sequences have low similarity to those in the public realm, providing better freedom to operate within that sequence space. The selection of the 48 enzymes provided in this kit was powered not only by Twist DNA synthesis capabilities but also a collaborative bioinformatics effort to refine the functional sequence space.
 

How Enzymes Were Selected For Our Kit

A total of 369 active transaminases were identified with 19 substrates. 273 of the enzymes were found to be active in 10% DMSO with 30 active at 60°C. Finally, the enzymes were tested for pH sensitivity and selectivity.

Criteria for Transaminase Screening

Criteria for Transaminase Screening

 

Below is a breakdown of the enzymes tested against various substrates in the varying conditions previously described (various % of DMSO, organic solvents, temperatures, and pH levels).

Number of Enzymes Graph

Experience expedited screening with Twist + bitBiome

Enzyme Screening 48 Enzymes for screening

Next-day shipping Next-day shipping

Scale-up available Scale-up available

Contact Us

Resources
FAQ

GENERAL INFORMATION

What purity are your enzymes?
What is the shelf life of your enzymes?
What is the selectivity of the enzymes?
What are the Typical Parameters under which the enzymes work?

PLANNING YOUR SCREENING EXPERIMENT

What should I use as a control substrate?
What are typical reaction conditions for the evolved enzymes?
What buffers can be used with the enzymes?
hat solvents can be used with the enzymes?
What is the tolerance to pH?
What is the tolerance to temperature?

TROUBLESHOOTING

What do I do if the substrate is very insoluble in water?
What do I do if low or no activity is found?
What do I do if there are too many hits and differences among them cannot be easily determined?
What do I do if a hit has been identified and the reaction needs to be optimized and scaled-up?
What do I do if a different amine donor is desired?
What do I do if I have other questions?

COMMON SCREENING QUESTIONS

I prepared my buffer/cofactor solution last week. Can I still use it?
What can I do if substrate solubility in aqueous media is a challenge and the reaction mixture is cloudy?
Is there an order in which reagents should be added?

OPTIMIZATION

What is the best way to optimize the reaction conditions (temperature, pH, co-solvent)?

QUALITY CONTROL

How do you ensure the activity of each enzyme in the kit?
How do you verify the quantity of enzyme powder in each kit?
How do you ensure the lysate powder is free from living expression hosts?
How do you confirm the shelf life of each batch?
Why is it important to check for the absence of living expression hosts?
What is a colorimetric method and why is it used?
What happens if a batch does not meet the quality standards?
How do you ensure the accuracy of your quality control processes?
Can customers request quality control reports for their specific enzyme kit batch?

GENERAL INFORMATION

What purity are your enzymes?
What is the shelf life of your enzymes?
What is the selectivity of the enzymes?
What are the Typical Parameters under which the enzymes work?

PLANNING YOUR SCREENING EXPERIMENT

What should I use as a control substrate?
What are typical reaction conditions for the evolved enzymes?
What buffers can be used with the enzymes?
hat solvents can be used with the enzymes?
What is the tolerance to pH?
What is the tolerance to temperature?

TROUBLESHOOTING

What do I do if the substrate is very insoluble in water?
What do I do if low or no activity is found?
What do I do if there are too many hits and differences among them cannot be easily determined?
What do I do if a hit has been identified and the reaction needs to be optimized and scaled-up?
What do I do if a different amine donor is desired?
What do I do if I have other questions?

COMMON SCREENING QUESTIONS

I prepared my buffer/cofactor solution last week. Can I still use it?
What can I do if substrate solubility in aqueous media is a challenge and the reaction mixture is cloudy?
Is there an order in which reagents should be added?

OPTIMIZATION

What is the best way to optimize the reaction conditions (temperature, pH, co-solvent)?

QUALITY CONTROL

How do you ensure the activity of each enzyme in the kit?
How do you verify the quantity of enzyme powder in each kit?
How do you ensure the lysate powder is free from living expression hosts?
How do you confirm the shelf life of each batch?
Why is it important to check for the absence of living expression hosts?
What is a colorimetric method and why is it used?
What happens if a batch does not meet the quality standards?
How do you ensure the accuracy of your quality control processes?
Can customers request quality control reports for their specific enzyme kit batch?
Explore the Transaminase sequence space
Explore the Transaminase sequence space
Explore the Transaminase sequence space